Matrix of average gene expression per cluster from single-cell RNA-seq pancreas data using smartseq2 method.

A sample of 2209 pancreas cells

Usage

ref_pan_smartseq2

Format

An object of class function of length 1.

Source

<https://hemberg-lab.github.io/scRNA.seq.datasets/human/pancreas/>

See also

Other ref: ref_MCA(), ref_cortex_dev(), ref_hema_microarray(), ref_immgen(), ref_moca_main(), ref_mouse.rnaseq(), ref_mouse_atlas(), ref_pan_indrop(), ref_tabula_muris_drop(), ref_tabula_muris_facs()

Examples

ref_pan_smartseq2(metadata = TRUE)
#> ExperimentHub with 1 record
#> # snapshotDate(): 2022-04-26
#> # names(): EH3453
#> # package(): clustifyrdatahub
#> # $dataprovider: S3
#> # $species: Homo sapiens
#> # $rdataclass: data.frame
#> # $rdatadateadded: 2020-05-14
#> # $title: ref_pan_smartseq2
#> # $description: Human pancreatic cell scRNA-seq (SmartSeq2)
#> # $taxonomyid: 9606
#> # $genome: hg38
#> # $sourcetype: RDA
#> # $sourceurl: https://scrnaseq-public-datasets.s3.amazonaws.com/scater...
#> # $sourcesize: NA
#> # $tags: c("SingleCellData", "SequencingData", "MicroarrayData",
#> #   "ExperimentHub") 
#> # retrieve record with 'object[["EH3453"]]'