Matrix of average gene expression per cluster from single-cell sci-RNA-seq3 from Mouse Organogenesis Cell Atlas.

100,000 cells

Usage

ref_moca_main

Format

An object of class function of length 1.

Source

<http://atlas.gs.washington.edu/mouse-rna/>

See also

Other ref: ref_MCA(), ref_cortex_dev(), ref_hema_microarray(), ref_immgen(), ref_mouse.rnaseq(), ref_mouse_atlas(), ref_pan_indrop(), ref_pan_smartseq2(), ref_tabula_muris_drop(), ref_tabula_muris_facs()

Examples

ref_moca_main(metadata = TRUE)
#> ExperimentHub with 1 record
#> # snapshotDate(): 2022-04-26
#> # names(): EH3448
#> # package(): clustifyrdatahub
#> # $dataprovider: washington.edu
#> # $species: Mus musculus
#> # $rdataclass: data.frame
#> # $rdatadateadded: 2020-05-14
#> # $title: ref_moca_main
#> # $description: Mouse Organogenesis Cell Atlas (main cell types)
#> # $taxonomyid: 10090
#> # $genome: mm10
#> # $sourcetype: RDA
#> # $sourceurl: https://oncoscape.v3.sttrcancer.org/atlas.gs.washington....
#> # $sourcesize: NA
#> # $tags: c("SingleCellData", "SequencingData", "MicroarrayData",
#> #   "ExperimentHub") 
#> # retrieve record with 'object[["EH3448"]]'