clustifyrdata (~300Mb)All references used in tutorials and more are available at https://github.com/rnabioco/clustifyrdata
# install.packages("devtools")
devtools::install_github("rnabioco/clustifyrdata")| name | desc | ntypes | ngenes | org | from_pub |
|---|---|---|---|---|---|
| ref_MCA | Mouse Cell Atlas | 713 | 8601 | mouse | from |
| ref_tabula_muris_drop | Tabula Muris (10X) | 112 | 23341 | mouse | from |
| ref_tabula_muris_facs | Tabula Muris (SmartSeq2) | 175 | 23341 | mouse | from |
| ref_mouse.rnaseq | Mouse RNA-seq from 28 cell types | 28 | 21214 | mouse | from |
| ref_moca_main | Mouse Organogenesis Cell Atlas (main cell types) | 37 | 26183 | mouse | from |
| ref_immgen | Mouse sorted immune cells | 253 | 22134 | mouse | from |
| ref_hema_microarray | Human hematopoietic cell microarray | 38 | 21246 | human | from |
| ref_cortex_dev | Human cortex development scRNA-seq | 47 | 56864 | human | from |
| ref_pan_indrop | Human pancreatic cell scRNA-seq (inDrop) | 14 | 20125 | human | from |
| ref_pan_smartseq2 | Human pancreatic cell scRNA-seq (SmartSeq2) | 12 | 25525 | human | from |