Plot called clusters on a tSNE or umap, for each reference cluster given — plot_call • clustifyr

Plot called clusters on a tSNE or umap, for each reference cluster given

Usage

plot_call(cor_mat, metadata, data_to_plot = colnames(cor_mat), ...)

Arguments

cor_mat: input similarity matrix
metadata: input metadata with tsne or umap coordinates and cluster ids
data_to_plot: colname of data to plot, defaults to all
...: passed to plot_dims

Value

list of ggplot object, cells projected by dr, colored by cell type classification