Create 5' UTR features.

Create 5' UTR features.

Usage

create_utrs5(x)

Arguments

x

ivl_df in BED12 format

See also

Other feature functions: create_introns(), create_tss(), create_utrs3()

Examples

x <- read_bed12(valr_example("mm9.refGene.bed.gz"))

create_utrs5(x)
#> # A tibble: 97 × 6
#>    chrom   start     end name         score strand
#>    <chr>   <int>   <int> <chr>        <chr> <chr> 
#>  1 chr1  3661429 3661579 NM_001011874 0     -     
#>  2 chr1  4399268 4399322 NM_001195662 0     -     
#>  3 chr1  4847774 4847994 NM_001159750 0     +     
#>  4 chr1  4847774 4847994 NM_011541    0     +     
#>  5 chr1  4848408 4848488 NM_001159751 0     +     
#>  6 chr1  4914046 5008815 NM_001290372 0     -     
#>  7 chr1  5009460 5009620 NM_021374    0     -     
#>  8 chr1  5060258 5060366 NM_001177795 0     -     
#>  9 chr1  5073166 5074531 NM_001310442 0     +     
#> 10 chr1  5073166 5074531 NM_133826    0     +     
#> # ℹ 87 more rows