Tidy analysis of yeast gene expression

This vignette explores yeast gene expression data based on the previous and excellent analysis by David Robinson is earlier blog posts here and here.

library(yeastgenes)
library(tidyverse)
library(cowplot)
library(ggokabeito)

yeast_gene_exp |>
  left_join(yeast_go_terms) |>
  filter(go_biological_process == "leucine biosynthesis") |>
  ggplot(
    aes(
      rate,
      exp,
      color = nutrient
    )
  ) +
  geom_point() +
  geom_smooth(method = "lm", se = FALSE) +
  facet_wrap(~ common_name + systematic_name) +
  theme_cowplot() +
  scale_color_okabe_ito()