Preparation for scRNA-seq analysis

Author

KR

Important

You will need to review this material before class 31.

Experimental methods

In this section we will analyze data generated by the 10x Genomics Chromium scRNA-seq platform. The following paper introduces the technology:

Zheng GXY, Terry JM, Belgrader P, et al. Massively parallel digital transcriptional profiling of single cells. Nat Communications. 2017;8:ncomms14049. https://doi.org/10.1038/ncomms14049 [Link].