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Generate a small RangedSummarizedExperiment object for tests and examples
Source:R/utils.R
mock_rse.Rd
A RangedSummarizedExperiment containing a subset of data from an RNA-seq experiment to measure the effects of IFN treatment of cell lines with wild-type or ADAR1-KO.
Examples
mock_rse()
#> class: RangedSummarizedExperiment
#> dim: 74 2
#> metadata(0):
#> assays(7): ALT nRef ... nC nG
#> rownames(74): site_SSR3_102_2 site_SSR3_125_2 ... site_DHFR_430_2
#> site_DHFR_513_2
#> rowData names(4): REF rpbz vdb sor
#> colnames(2): wt adar1_ko
#> colData names(1): sample