Bodhi HPC User Guide¶
Scheduled Maintenance
Bodhi undergoes scheduled maintenance on the last Thursday of every month. Jobs may be held or killed during the maintenance window. Plan your submissions accordingly.
Welcome to the documentation site for the Bodhi HPC cluster. Use the sections below to find what you need.
SLURM Documentation¶
Bodhi has migrated from IBM Spectrum LSF to SLURM. Our SLURM documentation covers everything you need to get your jobs running:
- Directives —
#BSUB→#SBATCHmapping - Commands — LSF-to-SLURM command equivalents
- Environment Variables —
$LSB_*→$SLURM_*mapping - Job Arrays — array job syntax changes
- Common Pain Points — OOM debugging, accounts, wall time
- Example Scripts — complete before/after job scripts
- Converter — automated
lsf2slurm.shhelper script - Interactive Sessions — persistent interactive jobs with tmux
- Resources — links to official SLURM documentation
Backups¶
Guidelines for backing up your data on the Bodhi cluster.
- Backup Instructions — what to back up, where, and how
Getting Help¶
- Contacts & Support — who to contact and how to get assistance